Gene ID | Functions | Supporting Data (Grade) | Prev. Refs | Figure 14 inclusion | Remarks |
---|---|---|---|---|---|
N/A | DA2DH | Fig. 12B (*) Fig. 13 (***) | N/A | Yes | Evidence of latent DA2DH activity; evolved strain produces d-arabitol |
N/A | LA2DH | Figure 7 (***) | N/A | Yes | Gene(s) encoding this function have yet to be identified |
9837 | DA4DH | N/A | [13] | No | Single KO shows no growth defect |
8905 | DA4DH | N/A | [13] | No | Single KO shows no growth defect |
14368 | RK | [13] | Yes | Data suggests RTO4_14368 is the only RK-encoding gene | |
16850 | XK | N/A | Yes | Inactive under tested conditions in this study,but transcribed in presence of acetate [15] | |
13562 | XR | N/A | [13] | Yes | Function unconfirmed in this study |
11882 | XR | N/A | Yes | In [40], 11,882 has one-tenth the activity of 9774 on d-xylose | |
9990 | DA2DH XDH | Fig. 9D (*) | [13] | Yes | Cannot rule out XDH function |
8988 | LXR XDH DA4DH | [13] | Yes | KO metabolite excretion patterns consistent with XDH activity | |
9774 | XR | Figure 2 (*) | Yes | Reduces l-arabinose, d-xylose, glyceraldehyde | |
16452 | LA4DH XDH | Figure 5D (***) | [13] | Yes | KO metabolite excretion patterns consistent with XDH activity |
12974 | LA4DH XDH | N/A | [13] | No | Pseudogene; no growth defects with KO |
12977 | LA4DH XDH | Figure 5D (***) N/A | [13] | Yes | KO has slight growth defect on l-arabitol;cannot rule out XDH activity without metabolite profiling |